Ontologies, Classifications, and Coding

Advancing Real-World Evidence Through a Federated Health Data Network (EHDEN): Descriptive Study

Clair Blacketer, Martijn J Schuemie, Maxim Moinat, Erica A Voss, Montse Camprubi, Peter R Rijnbeek, Patrick B Ryan

J Med Internet Res 2025 (Aug 07); 27:e74119

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Classifying Patient Complaints Using Artificial Intelligence–Powered Large Language Models: Cross-Sectional Study

Sky Wei Chee Koh, Eunice Rui Ning Wong, John Chong Min Tan, Stephanie C C van der Lubbe, Jun Cong Goh, Ethan Sheng Yong Ching, Ian Wen Yih Chia, Si Hui Low, Ping Young Ang, Queenie Quek, Mehul Motani, Jose M Valderas

J Med Internet Res 2025 (Aug 06); 27:e74231

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Framework for Race-Specific Prostate Cancer Detection Using Machine Learning Through Gene Expression Data: Feature Selection Optimization Approach

David Agustriawan, Adithama Mulia, Marlinda Vasty Overbeek, Vincent Kurniawan, Jheno Syechlo, Moeljono Widjaja, Muhammad Imran Ahmad

JMIR Bioinform Biotech 2025 (Jul 31); 6:e72423

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Large Language Model Symptom Identification From Clinical Text: Multicenter Study

Andrew J McMurry, Dylan Phelan, Brian E Dixon, Alon Geva, Daniel Gottlieb, James R Jones, Michael Terry, David E Taylor, Hannah Callaway, Sneha Manoharan, Timothy Miller, Karen L Olson, Kenneth D Mandl

J Med Internet Res 2025 (Jul 31); 27:e72984

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Automating Colon Polyp Classification in Digital Pathology by Evaluation of a “Machine Learning as a Service” AI Model: Algorithm Development and Validation Study

David Beyer, Evan Delancey, Logan McLeod

JMIR Form Res 2025 (Jul 31); 9:e67457

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Evaluating the Reasoning Capabilities of Large Language Models for Medical Coding and Hospital Readmission Risk Stratification: Zero-Shot Prompting Approach

Parvati Naliyatthaliyazchayil, Raajitha Muthyala, Judy Wawira Gichoya, Saptarshi Purkayastha

J Med Internet Res 2025 (Jul 30); 27:e74142

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K-Means Clustering and Classification of Breast Cancer Images Using Histogram of Oriented Gradients Features and Convolutional Neural Network Models: Diagnostic Image Analysis Study

Said Salloum

JMIR Form Res 2025 (Jul 29); 9:e71974

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Autoencoder-Based Representation Learning for Similar Patients Retrieval From Electronic Health Records: Comparative Study

Deyi Li, Aditi Shukla, Sravani Chandaka, Bradley Taylor, Jie Xu, Mei Liu

JMIR Med Inform 2025 (Jul 24); 13:e68830

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A Weighted Voting Approach for Traditional Chinese Medicine Formula Classification Using Large Language Models: Algorithm Development and Validation Study

Zhe Wang, Keqian Li, Suyuan Peng, Lihong Liu, Xiaolin Yang, Keyu Yao, Heinrich Herre, Yan Zhu

JMIR Med Inform 2025 (Jul 24); 13:e69286

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Identifying People Living With or Those at Risk for HIV in a Nationally Sampled Electronic Health Record Repository Called the National Clinical Cohort Collaborative: Computational Phenotyping Study

Eric Hurwitz, Cara D Varley, A Jerrod Anzolone, Vithal Madhira, Amy L Olex, Jing Sun, Dimple Vaidya, Nada Fadul, Jessica Y Islam, Lesley E Jackson, Kenneth J Wilkins, Zachary Butzin-Dozier, Dongmei Li, Sandra E Safo, Julie A McMurry, Pooja Maheria, Tommy Williams, Shukri A Hassan, Melissa A Haendel, Rena C Patel, The National Clinical Cohort Collaborative (N3C) Consortium

JMIR Med Inform 2025 (Jul 11); 13:e68143

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Language Models for Multilabel Document Classification of Surgical Concepts in Exploratory Laparotomy Operative Notes: Algorithm Development Study

Jeremy A Balch, Sasank S Desaraju, Victoria J Nolan, Divya Vellanki, Timothy R Buchanan, Lindsey M Brinkley, Yordan Penev, Ahmet Bilgili, Aashay Patel, Corinne E Chatham, David M Vanderbilt, Rayon Uddin, Azra Bihorac, Philip Efron, Tyler J Loftus, Protiva Rahman, Benjamin Shickel

JMIR Med Inform 2025 (Jul 09); 13:e71176

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Developing a SNOMED CT–Based Value Set to Document Symptoms and Diagnoses for Adverse Drug Events: Mixed Methods Study

Erica Y Lau, Linda Bird, Anthony Lau, Yau-Lam Alex Chau, Katherine Butcher, Susan Buchkowsky, Kira Gossack-Keenan, Cheryl Sadowski, Corinne M Hohl

JMIR Med Inform 2025 (Jul 08); 13:e70167

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Artificial Intelligence to Improve Clinical Coding Practice in Scandinavia: Crossover Randomized Controlled Trial

Taridzo Chomutare, Therese Olsen Svenning, Miguel Ángel Tejedor Hernández, Phuong Dinh Ngo, Andrius Budrionis, Kaisa Markljung, Lill Irene Hind, Torbjørn Torsvik, Karl Øyvind Mikalsen, Aleksandar Babic, Hercules Dalianis

J Med Internet Res 2025 (Jul 03); 27:e71904

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Enhancing the Predictions of Cytomegalovirus Infection in Severe Ulcerative Colitis Using a Deep Learning Ensemble Model: Development and Validation Study

Jeong Heon Kim, A Reum Choe, Ju Ran Byeon, Yehyun Park, Eun Mi Song, Seong-Eun Kim, Eui Sun Jeong, Rena Lee, Jin Sung Kim, So Hyun Ahn, Sung Ae Jung

JMIR Med Inform 2025 (Jul 01); 13:e64987

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Performance of ChatGPT-4o and Four Open-Source Large Language Models in Generating Diagnoses Based on China’s Rare Disease Catalog: Comparative Study

Wei Zhong, YiFan Liu, Yan Liu, Kai Yang, HuiMin Gao, HuiHui Yan, WenJing Hao, YouSheng Yan, ChengHong Yin

J Med Internet Res 2025 (Jun 18); 27:e69929

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Detecting Redundant Health Survey Questions by Using Language-Agnostic Bidirectional Encoder Representations From Transformers Sentence Embedding: Algorithm Development Study

Sunghoon Kang, Hyewon Park, Ricky Taira, Hyeoneui Kim

JMIR Med Inform 2025 (Jun 10); 13:e71687

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Integrating CEN ISO/TS 82304-2 in the Catalan Health App Assessment Framework: Comparative Case Study

Berta Llebot Casajuana, Petra Hoogendoorn, Maria Villalobos-Quesada, Carme Pratdepàdua Bufill

JMIR Mhealth Uhealth 2025 (Jun 04); 13:e67858

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Enhancing the Accuracy of Human Phenotype Ontology Identification: Comparative Evaluation of Multimodal Large Language Models

Wei Zhong, Mingyue Sun, Shun Yao, YiFan Liu, Dingchuan Peng, Yan Liu, Kai Yang, HuiMin Gao, HuiHui Yan, WenJing Hao, YouSheng Yan, ChengHong Yin

J Med Internet Res 2025 (Jun 02); 27:e73233

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Application of the Bidirectional Encoder Representations from Transformers Model for Predicting the Abbreviated Injury Scale in Patients with Trauma: Algorithm Development and Validation Study

Jun Tang, Yang Li, Keyu Luo, Jiangyuan Lai, Xiang Yin, Dongdong Wu

JMIR Form Res 2025 (May 29); 9:e67311

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Toward a Domain-Overarching Metadata Schema for Making Health Research Studies FAIR (Findable, Accessible, Interoperable, and Reusable): Development of the NFDI4Health Metadata Schema

Haitham Abaza, Aliaksandra Shutsko, Sophie A I Klopfenstein, Carina N Vorisek, Carsten Oliver Schmidt, Claudia Brünings-Kuppe, Vera Clemens, Johannes Darms, Sabine Hanß, Timm Intemann, Franziska Jannasch, Elisa Kasbohm, Birte Lindstädt, Matthias Löbe, Katharina Nimptsch, Ute Nöthlings, Marisabel Gonzalez Ocanto, Tracy Bonsu Osei, Ines Perrar, Manuela Peters, Tobias Pischon, Ulrich Sax, Matthias B Schulze, Florian Schwarz, Carolina Schwedhelm, Sylvia Thun, Dagmar Waltemath, Atinkut A Zeleke, Wolfgang Müller, Martin Golebiewski

JMIR Med Inform 2025 (May 21); 13:e63906

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