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Exploring Cancer Incidence, Risk Factors, and Mortality in the Lleida Region: Interactive, Open-source R Shiny Application for Cancer Data Analysis

Exploring Cancer Incidence, Risk Factors, and Mortality in the Lleida Region: Interactive, Open-source R Shiny Application for Cancer Data Analysis

Finally, to encapsulate this system and facilitate the deployment, we ran it into Docker containers that Docker Compose orchestrated [17]. Docker permits encapsulating and deploying the execution of applications in packages. All these technologies are free of charge. The deployment and code are available to download in this Git Hub repository [18]. Until the implementation of this application, PBCR professionals were manually extracting the data on demand.

Didac Florensa, Jordi Mateo-Fornes, Sergi Lopez Sorribes, Anna Torres Tuca, Francesc Solsona, Pere Godoy

JMIR Cancer 2023;9:e44695

Enabling Agile Clinical and Translational Data Warehousing: Platform Development and Evaluation

Enabling Agile Clinical and Translational Data Warehousing: Platform Development and Evaluation

These and further functionalities are not supported by existing cloud-based deployment solutions for i2b2 and tran SMART, such as the Integrated Data Repository Toolkit (IDRT) [26], i2b2 Quickstart [27], or the prebuilt images available on Docker Hub [28] (see the Discussion section for an in-depth comparison).

Helmut Spengler, Claudia Lang, Tanmaya Mahapatra, Ingrid Gatz, Klaus A Kuhn, Fabian Prasser

JMIR Med Inform 2020;8(7):e15918